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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs61742093 chr6:27879982 A/G ZFP57 chr6:29640169-29648887:- 0.91 8.7 5.23E-17 Box Plot
THCA rs61761159 chr12:25384619 A/G CSNK2A1P chr11:11373323-11374904:- -0.34 -6.36 4.85E-10 Box Plot
THCA rs61762369 chr12:25378869 T/G CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs617624 chr17:18283627 C/T CCDC144A chr17:16592851-16681195:+ 0.34 6.26 8.62E-10 Box Plot
THCA rs617624 chr17:18283627 C/T LOC162632 chr17:16614993-16707819:+ 0.55 10.02 1.44E-21 Box Plot
THCA rs61762416 chr12:25376000 G/A CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs61762424 chr12:25373194 A/T CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs61762430 chr12:25372593 T/C CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs61762431 chr12:25372109 A/T CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs61763579 chr12:25364863 C/T CSNK2A1P chr11:11373323-11374904:- -0.33 -6.16 1.55E-9 Box Plot
THCA rs61764370 chr12:25360224 A/C CSNK2A1P chr11:11373323-11374904:- -0.33 -6.11 2.09E-9 Box Plot
THCA rs61772647 chr1:80460149 A/G PAX2 chr10:102495360-102589698:+ -0.34 -5.95 5.11E-9 Box Plot
THCA rs61774278 chr1:80481528 G/C PAX2 chr10:102495360-102589698:+ -0.35 -6.03 3.21E-9 Box Plot
THCA rs61774319 chr1:80531936 G/A PAX2 chr10:102495360-102589698:+ -0.41 -6.54 1.57E-10 Box Plot
THCA rs61802517 chr1:144560753 T/C LOC728855 chr1:149576161-149672983:+ 0.32 6.59 1.18E-10 Box Plot